Analysis workflows
Use cases
Welcome
Data
WGS
Microhaplotypes
SNPs
pfhrp2/3 deletion counts
Tool landscaping
The landscaping matrix
Installing via the plasmogenepi.r-universe
Software standards
Overview by tool
Tutorials
coiaf
Summary
Installation
Estimating COI from SNP data
DEploidIBD
Summary
Installation
Part 1: Preparing your data
Part 2: Running DEploidIBD
DRpower
Summary
Installation
Designing a study
Analysis of
pfhrp2/3
data
dcifer
Summary
Installation
Tutorial
estMOI
Summary
Installation
Analyze data with
estMOI
hierfstat
Summary
Installation
Analyze data with
hierfstat
hmmIBD
Summary
Overview
Installation
Basic IBD analysis with
hmmIBD
moire
Summary
Installation
Running moire example
MultiLociBiallelicModel
Summary
Installation
Running
MultiLociBiallelicModel
on bialleic SNP data
paneljudge
Summary
Installation
Tutorial for Running
paneljudge
THEREALMcCOIL
Summary
Installation
Analyze data with
THEREALMcCOIL
Analysis workflows
Use cases
Coming soon!
How to contribute
Get involved
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RADISH23 Hackathon
Contributors
Future work
Analysis workflows
Use cases
COMING SOON!
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Analysis workflows
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