Software standards
Overview by tool
Welcome
Data
Data description
The data-DAG (TODO)
Tool landscaping
The landscaping matrix
Installing via the plasmogenepi.r-universe (TODO)
Tutorials
Overview of all tutorials
coiaf
Summary
Installation
Estimating COI from SNP data
DEploidIBD
Summary
Installation
Part 1: Preparing your data
Part 2: Running DEploidIBD
DRpower
Summary
Installation
Designing a study
Analysis of
pfhrp2/3
data
dcifer
Summary
Installation
Tutorial
estMOI
Summary
Installation
Analyze data with
estMOI
Hierfstat
Summary
Installation
Analyze data with
hierfstat
hmmIBD
Summary
Overview
Installation
Basic IBD analysis with
hmmIBD
hmmibdr
Summary
malaria.em
Summary
MalHaploFreq
Summary
MLMOI
Summary
moire
Summary
Installation
Running moire example
MultiLociBiallelicModel
Summary
Installation
Running
MultiLociBiallelicModel
on bialleic SNP data
paneljudge
Summary
Installation
Tutorial for Running
paneljudge
rehh
Summary
Installation
THEREALMcCOIL
Summary
Installation
Analyze data with
THEREALMcCOIL
Software standards
Overview by tool
How do I get my tool on PGEforge? (TODO)
Events and meetings
RADISH23 Hackathon
Contributors
Overview of tools based on software standards
Back to top
Analyze data with
THEREALMcCOIL
RADISH23 Hackathon