Main use-cases | Study design, prevalence estimation |
Authors | Bob Verity, Shazia Ruybal-Pesántez |
Latest version | v1.0.2 |
License | MIT |
Website | https://mrc-ide.github.io/Drpower |
Code repository | https://github.com/mrc-ide/Drpower |
Publication | Unpublished |
Tutorial author | Bob Verity |
Tutorial date | 10-Dec-23 |
DRpower
Summary sheet
Purpose
The DRpower R package is primarily intended for pfhrp2/3 deletion studies, however, it can also be applied to drug resistance data - or indeed and data that takes the form of a prevalence estimate (numerator and denominator). It can be used in two main ways:
- In the design phase of a study to perform power and sample size calculations. To tell us how many sites we need to recruit, and how many samples per site.
- In the analysis phase of a study to estimate the prevalence of the marker of interest and optionally to compare this value against a set threshold.
The approach uses a Bayesian model to estimate the prevalence, which takes into account the potential of intra-cluster correlation in multi-site studies.
Existing resources
- The DRpower website gives details of the statistical arguments behind the tool as well as installation instructions and worked tutorials for both design and analysis phases.
- The pfhrp2/3 Planner provides a web-based interface to the DRpower tool. It does not have all the functionality of the R package, but can be used to carry out simple design and analysis tasks in a user-friendly way.
Citation
Please use the following citation:
@Manual{,
title = {DRpower: Study design and analysis for pfhrp2/3 deletion prevalence studies},
author = {Bob Verity and Shazia Ruybal},
note = {R package version 1.0.2},
}