DRpower



Summary sheet

Main use-cases Study design, prevalence estimation
Authors Bob Verity, Shazia Ruybal-Pesántez
Latest version v1.0.2
License MIT
Website https://mrc-ide.github.io/Drpower
Code repository https://github.com/mrc-ide/Drpower
Publication Unpublished
Tutorial author Bob Verity
Tutorial date 10-Dec-23

Purpose

The DRpower R package is primarily intended for pfhrp2/3 deletion studies, however, it can also be applied to drug resistance data - or indeed and data that takes the form of a prevalence estimate (numerator and denominator). It can be used in two main ways:

  1. In the design phase of a study to perform power and sample size calculations. To tell us how many sites we need to recruit, and how many samples per site.
  2. In the analysis phase of a study to estimate the prevalence of the marker of interest and optionally to compare this value against a set threshold.

The approach uses a Bayesian model to estimate the prevalence, which takes into account the potential of intra-cluster correlation in multi-site studies.

Existing resources

  • The DRpower website gives details of the statistical arguments behind the tool as well as installation instructions and worked tutorials for both design and analysis phases.
  • The pfhrp2/3 Planner provides a web-based interface to the DRpower tool. It does not have all the functionality of the R package, but can be used to carry out simple design and analysis tasks in a user-friendly way.

Citation

Please use the following citation:

@Manual{,
    title = {DRpower: Study design and analysis for pfhrp2/3 deletion prevalence studies},
    author = {Bob Verity and Shazia Ruybal},
    note = {R package version 1.0.2},
  }
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