References

Baguelin, Marc, Albert Jan Van A. J. V. Hoek, Mark Jit, Stefan Flasche, Peter J. P. J. Peter J. White, W. J. John Edmunds, Albert Jan A. J. van Hoek, et al. 2010. “Vaccination Against Pandemic Influenza A/H1N1v in England: A Real-Time Economic Evaluation.” Vaccine 28 (12): 2370–84. https://doi.org/10.1016/j.vaccine.2010.01.002.

Endo, Akira, Edwin van Leeuwen, and Marc Baguelin. 2019. “Introduction to Particle Markov-Chain Monte Carlo for Disease Dynamics Modellers.” Epidemics 29 (December): 100363.

Ghani, Azra, Marc Baguelin, Jamie Griffin, Stefan Flasche, Albert Jan van Hoek, Simon Cauchemez, Christl Donnelly, et al. 2009. “The Early Transmission Dynamics of H1N1pdm Influenza in the United Kingdom.” PLoS Currents 1 (January): RRN1130. https://doi.org/10.1371/currents.RRN1130.

Hoffman, Matthew D, and Andrew Gelman. 2014. “The No-U-Turn Sampler: Adaptively Setting Path Lengths in Hamiltonian Monte Carlo.” Journal of Machine Learning Research 15: 1351–81. http://mcmc-jags.sourceforge.net.

Neal, Radford M. 2011. “MCMC Using Hamiltonian Dynamics.” In Handbook of Markov Chain Monte Carlo, 113–62. https://doi.org/10.1201/b10905-6.

Syed, Saifuddin, Alexandre Bouchard-Côté, George Deligiannidis, and Arnaud Doucet. 2022. “Non-Reversible Parallel Tempering: A Scalable Highly Parallel MCMC Scheme.” Journal of the Royal Statistical Society Series B: Statistical Methodology 84 (2): 321–50. https://doi.org/10.1111/rssb.12464.