Appendix B — Colophon

Key versions:

Rendered on 2026-03-27 16:25:24.364873 using quarto 1.9.36

Full system information:

sessioninfo::session_info()
#> ─ Session info ───────────────────────────────────────────────────────────────
#>  setting  value
#>  version  R version 4.5.3 (2026-03-11)
#>  os       Ubuntu 24.04.4 LTS
#>  system   x86_64, linux-gnu
#>  ui       X11
#>  language (EN)
#>  collate  C.UTF-8
#>  ctype    C.UTF-8
#>  tz       UTC
#>  date     2026-03-27
#>  pandoc   3.1.3 @ /usr/bin/ (via rmarkdown)
#>  quarto   1.9.36 @ /usr/local/bin/quarto
#> 
#> ─ Packages ───────────────────────────────────────────────────────────────────
#>  package     * version date (UTC) lib source
#>  brio          1.1.5   2024-04-24 [1] RSPM
#>  cli           3.6.5   2025-04-23 [1] RSPM
#>  cpp11         0.5.3   2026-01-20 [1] RSPM
#>  decor         1.0.2   2023-07-01 [1] RSPM
#>  digest        0.6.39  2025-11-19 [1] RSPM
#>  dust2         0.3.28  2026-03-27 [1] Github (mrc-ide/dust2@83721f7)
#>  evaluate      1.0.5   2025-08-27 [1] RSPM
#>  fastmap       1.2.0   2024-05-15 [1] RSPM
#>  fs            2.0.1   2026-03-24 [1] RSPM
#>  glue          1.8.0   2024-09-30 [1] RSPM
#>  htmltools     0.5.9   2025-12-04 [1] RSPM
#>  htmlwidgets   1.6.4   2023-12-06 [1] RSPM
#>  jsonlite      2.0.0   2025-03-27 [1] RSPM
#>  knitr         1.51    2025-12-20 [1] RSPM
#>  later         1.4.8   2026-03-05 [1] RSPM
#>  lifecycle     1.0.5   2026-01-08 [1] RSPM
#>  magrittr      2.0.4   2025-09-12 [1] RSPM
#>  monty         0.4.9   2026-03-27 [1] Github (mrc-ide/monty@53ae53f)
#>  odin2         0.3.44  2026-03-27 [1] Github (mrc-ide/odin2@0cc4a0e)
#>  otel          0.2.0   2025-08-29 [1] RSPM
#>  pillar        1.11.1  2025-09-17 [1] RSPM
#>  pkgbuild      1.4.8   2025-05-26 [1] RSPM
#>  pkgconfig     2.0.3   2019-09-22 [1] RSPM
#>  pkgload       1.5.0   2026-02-03 [1] RSPM
#>  processx      3.8.6   2025-02-21 [1] RSPM
#>  ps            1.9.1   2025-04-12 [1] RSPM
#>  purrr         1.2.1   2026-01-09 [1] RSPM
#>  quarto        1.5.1   2025-09-04 [1] RSPM
#>  R6            2.6.1   2025-02-15 [1] RSPM
#>  Rcpp          1.1.1   2026-01-10 [1] RSPM
#>  rlang         1.1.7   2026-01-09 [1] RSPM
#>  rmarkdown     2.31    2026-03-26 [1] RSPM
#>  rstudioapi    0.18.0  2026-01-16 [1] RSPM
#>  sessioninfo   1.2.3   2025-02-05 [1] RSPM
#>  tibble        3.3.1   2026-01-11 [1] RSPM
#>  usethis       3.2.1   2025-09-06 [1] RSPM
#>  vctrs         0.7.2   2026-03-21 [1] RSPM
#>  xfun          0.57    2026-03-20 [1] RSPM
#>  yaml          2.3.12  2025-12-10 [1] RSPM
#> 
#>  [1] /home/runner/work/_temp/Library
#>  [2] /opt/R/4.5.3/lib/R/site-library
#>  [3] /opt/R/4.5.3/lib/R/library
#> 
#> ──────────────────────────────────────────────────────────────────────────────