Set equilibrium

This will update the IBM parameters to match the equilibrium parameters and set up the initial human and mosquito population to achieve init_EIR

set_equilibrium(
  parameters,
  init_EIR,
  eq_params = NULL,
  EIR_population_input = "adult"
)

Arguments

parameters

model parameters to update

init_EIR

the desired initial EIR (infectious bites per adult person per year).

eq_params

parameters from the malariaEquilibrium package, if null The default malariaEquilibrium parameters will be used (not applicable for P. vivax).

EIR_population_input

the population corresponding with the initial EIR units, where options are "adult" (default) or "total".