Plot loglikelihood 95% credible intervals — plot_rung

Plot loglikelihood 95% credible intervals.

plot_rung_loglike(
  x,
  chain = 1,
  phase = "sampling",
  x_axis_type = 1,
  y_axis_type = 1
)

Arguments

x: an object of class drjacoby_output
chain: which chain to plot.
phase: which phase to plot. Must be either "burnin" or "sampling".
x_axis_type: how to format the x-axis. 1 = integer rungs, 2 = values of the thermodynamic power.
y_axis_type: how to format the y-axis. 1 = raw values, 2 = truncated at auto-chosen lower limit. 3 = double-log scale.