An example country site file
example_site.RdA site file containing all of the input components for running a setting-specific malariasimulation model run.
Format
A list with 10 variables:
- country
The country name
- version
Site file version
- admin_level
The levels of spatial disaggregation
- sites
Unique sites
- shape
Sptial boundaries (set to NA in testing shapefile)
- cases_deaths
Epidemiological site data
- prevalence
Prevalence data
- interventions
Intervention coverage and specification
- population
Population, population at risk mand age-disaggregated population projections
- demography
Demographic projections
- vectors
Vector specieis and pyrethroid resistance
- seasonality
Seasonal profile parameters, monthly rainfall and fourier predictions
- blood_disorders
Blood disorder data
- accessibility
Accessibility data
- eir
Calibrated eir