Historical Epidemiological Data
historical_epi.RmdCases and deaths
site_file$cases_deaths
Where available this includes the time series of cases and deaths for the country as reported in previous editions of the world malaria report. Other useful data include the world malaria report1 population at risk and uncertainty intervals for estimates.
Prevalence
site_file$prevalence
Where available this includes the population at risk weighted average parasite prevalence time series from the Malaria Atlas Project2
Plasmodium falciparuim parasite prevalence
(PfPr) is reported for children aged between 2-10 years,
summarized from the malaria atlas project raster entitled: “Plasmodium
falciparum PR2 - 10 version 2020”.
Plasmodium vivax parasite prevalence (PvPr) is
reported for individuals aged between 1-99 years, summarized from the
malaria atlas project raster entitled: “Plasmodium vivax PR1-99 version
2020”.
Prevalence estimates are used for calibrating the baseline EIR.