Attach parameters dealing with immune (NAT) dynamics to parameter list

Attach parameters dealing with immune (NAT) dynamics to parameter list

make_immune_parameters(
  parameters,
  vfr,
  mu_ab_infection = NULL,
  std10_infection = NULL
)

Arguments

parameters

a list of model parameters

vfr

a vector from variant_fold_reduction_vector

mu_ab_infection

a vector of values associated with NAT for each infection bout; please read attach_event_listeners_natural_immunity carefully depending on if you are using the additive or overwriting NAT model, because this parameter's interpretation will change. It may also be given as a vector, with each column indexing a day in the simulation (so it is equal to time_period).

std10_infection

a standard deviation for log-normal draw of NAT values