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All functions

get_custom()
Get more specific outputs
get_custom_output()
Get more specific outputs
get_daily_decay()
Daily Effective Decay
get_decay_mat()
Decay matrix for ITN or SMC
get_itn_usage_mat()
Produce matrix of population ITN usage
get_output_colnames()
Get column names for simulation output
get_parameters()
Create parameters for malariasimple
get_peak_cc()
Timing of peak carrying capacity
get_seasonal_forcing()
Get daily seasonal forcing
make_2d()
Converts 3D to long 2D
malariasimple_deterministic
Deterministic malaria model generator
malariasimple_stochastic
Stochastic malaria model generator
parameter_draws_df
Parameter draws (P. falciparum)
run_simulation()
Run deterministic malariasimple
set_bednets()
Set ITN parameters
set_drug_params()
Set drug parameter defaults
set_equilibrium()
Set equilibrium
set_rainfall_manual()
Add manual rainfall forcing
set_seasonality()
Add seasonal patterns
set_smc()
Set SMC parameters