Add coverage or doses information to the input popim_vacc_activities object

For each line in the popim_vacc_activities object the given information of coverage is converted to doses, or vice versa, using the target population size implied by the popim_population object supplied. If both coverage and doses are given for any activity, the function checks if they are consistent with the population size, and fails if there are any inconsistencies.

complete_vacc_activities(vacc, pop)

Arguments

vacc

popim_vacc_activities object

pop

popim_population object

Value

The supplied object of class popim_vacc_activities, updated to have both doses and coverage information.

Author

Tini Garske

Examples

## set up some vaccination activities:
vacc <- popim_vacc_activities(region = "UK", year = 2001:2003,
                              age_first = 0, age_last = 0,
                              coverage = c(0.8, 0.8, NA),
                              doses = c(NA, NA, 60),
                              targeting = "random")
## set up a population to which these activities shall apply:
pop <- popim_population(region = "UK", year_min = 2000, year_max = 2005,
                        age_min = 0, age_max = 10)
pop$pop_size <- 100 ## cohort size of 100 for all cohorts

## fill in missing coverage/doses information based on population size:
vacc <- complete_vacc_activities(vacc, pop)