Process simulation output

spim_simulate_process_output(
  obj,
  combined_region,
  regions,
  incidence_states,
  reset_states = FALSE,
  rm.rtUK = FALSE,
  output_region = NULL,
  simulation_start_date = NULL
)

Arguments

obj

A simulated object

combined_region

The name of the aggregated region (e.g. 'england)

regions

Character vector of regions to use

incidence_states

Character vector of states to calculate incidence

reset_states

Logical, indicating if incidence states should be reset to zero at the start of the simulation

rm.rtUK

Logical, indicating if the aggregated UK trajectory should be removed

output_region

Character vector of regions to output, defaults to combined_region

simulation_start_date

If not NULL then removes all data before the given date.