Check Rt from simulation — spim_plot_check_rt • spimalot

Diagnostic plots for checking Rt from simulation

spim_plot_check_rt(
  summary_state,
  dates,
  combined_state = NULL,
  Rt_state = "eff_Rt_general_both"
)

Arguments

summary_state: State from simulation summary object
dates: Dates to plot vertical lines at
combined_state: Optional state from combined object
Rt_state: Rt states to plot, default is effective average Rt